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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798067.1_cds_XP_016458362.1_5160
CDS Infomation

[gene=LOC107782038] [db_xref=GeneID:107782038] [protein=beta-carotene isomerase D27, chloroplastic-like] [protein_id=XP_016458362.1] [location=complement(join(26251..26388,26746..26814,30123..30203,30337..30428,30728..30827,30986..31087,31194..31286,31370..31501))] [gbkey=CDS]
Sequence

ATGCCAAACAACCCTGATAGAGTAGGAAGTCCGGATATGGATATGTTTCAAATGCCCTCG
TCCCTCTTCGCTTCGCTCAAAGGAAAAGTTGATATTCGCGTTTCGTGCTTCTCTACTAGT
AAATCAGAACCTATTGAAGCAAGAAAAAACAAGTCTCCTGTTGCTTACAAGCCCGGCGTG
TTTGATAACCTGTTCCTAAGTCTATTCCGGAACAAAATGGTCCAGGAGACTCGGTGGGAC
TCTGATAAGCATGGGTACGAGGGGCTAATTGAAGTGGCACATCGTCTGACGGTTGGTCAA
AACAATTCCGAAACTAGAGACGCCGCGGTCCGGATATTGAGATCACTATTCCCTCCTCTG
TTGTTGGAGCTCTACCGGATGCTTGTTGTACCTATAGATAGTGGTAAATTTGCAGCCTTG
ATGGTTGCAAGGGTGACTGCATTATCTTGTCCTTGGCTCATGGGTCCGTGCGCTATTAAT
TCGGTGGATCTTCCTAATGGTTCCTCTTTGATGAGTGGGGTTTTTGTGGAGAAATGCAAG
TATCTGGAAGAGAGCAAATGTGTGGGTGTATGTATTAATACATGTAAACTCCCTACACAG
ACTTTCTTCAAGGATCACATGGGAGTTCCATTGGTGATGGAGCCAAACTTCACCGATTAT
AGCTGCCAGTTTAAATTCGGGATTCTACCTCCTCAGCCAGAAGCTGACGACACTCTTAAA
GAGCCATGCTTGGAGATATGCCCCAACGCTGTTCGCCGAAAAGAGATGAGCCATAACATG
GATGCACACAAGTGTCCGAAAGCATGA

Peptide Sequence

PEP ID

XP_016458362.1
PEP Infomation

PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Nicotiana tabacum]
Sequence

MPNNPDRVGSPDMDMFQMPSSLFASLKGKVDIRVSCFSTSKSEPIEARKNKSPVAYKPGV
FDNLFLSLFRNKMVQETRWDSDKHGYEGLIEVAHRLTVGQNNSETRDAAVRILRSLFPPL
LLELYRMLVVPIDSGKFAALMVARVTALSCPWLMGPCAINSVDLPNGSSLMSGVFVEKCK
YLEESKCVGVCINTCKLPTQTFFKDHMGVPLVMEPNFTDYSCQFKFGILPPQPEADDTLK
EPCLEICPNAVRRKEMSHNMDAHKCPKA

Transcript Sequence

Gene sequence data has not been registered.